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manuscript-revision-a1

Manuscript revision A1: reconcile HPRCv2 sample counts

Metadata

Statusdone
Assignedagent-2468
Agent identity3577bc75d6ed4f1947509aa5c086c91ce7c997c7806dab6bf6affac647452647
Created2026-06-17T14:37:55.304394624+00:00
Started2026-06-17T15:31:01.043500038+00:00
Completed2026-06-17T15:39:00.079115580+00:00
Tagseval-scheduled
Eval score0.93
└ blocking impact0.95
└ completeness0.92
└ constraint fidelity0.70
└ coordination overhead0.94
└ correctness0.93
└ downstream usability0.96
└ efficiency0.91
└ intent fidelity0.83
└ style adherence0.94

Description

Mechanical audit. Establish the correct individuals / HPRC haplotypes / total assemblies triple for the exact release used by this manuscript. Check submission/paper.tex, data indices, AGENTS.md, subtelomeric_analysis_report.md, and discoverable HPRCv2 release metadata. Do not assume 232/464 or 233/465; prove it from local inputs.

Write paper_prep/manuscript_revision/A1_sample_counts.md with: source paths inspected, confirmed counts, every manuscript occurrence needing replacement, and exact proposed wording for abstract/methods/captions. Do not edit paper.tex directly.

Validation

  • Artifact exists
  • Gives one confirmed count triple or says what remains unresolved
  • Lists all affected locations in submission/paper.tex with line numbers
  • Distinguishes HPRC haplotypes from CHM13/total assemblies

Depends on

Required by

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