integrate-or4f-deep

Metadata

Status	done
Assigned	`agent-500`
Agent identity	`ead7f53029b7d01980e12f8beb6ad13f6907750479eb2951dd75eb63951922b8`
Created	2026-04-02T03:38:48.703897249+00:00
Started	2026-04-02T03:49:25.200257034+00:00
Completed	2026-04-02T03:53:17.820167348+00:00
Tags	`eval-scheduled`
Eval score	0.90
└ blocking impact	0.85
└ completeness	0.95
└ coordination overhead	0.90
└ correctness	0.95
└ downstream usability	0.90
└ efficiency	0.85
└ intent fidelity	0.98
└ style adherence	0.85

Description

Goal

Integrate all OR4F deep research findings into comprehensive summary:

Synthesize findings from all 6 research subtasks
Address each original question with evidence or 'not known'
Connect findings to our specific PHR results (58/72 copies, C3/C11 communities)
Create detailed research summary with citations

Input Files

or4f_functional_characterization.md
subtelomeric_or_biology_literature.md
or4f_copy_number_variation.md
multi_copy_or_significance.md
or4f_disease_associations.md
phr_or_biology_connection.md

Output

Save as deep_research_olfactory_receptors.md

Validation

Each of 6 original questions addressed
Literature references cited throughout
Connection to PHR findings (58 copies, 4 families, C3/C11) made
All input research files integrated

## Goal
Integrate all OR4F deep research findings into comprehensive summary:
- Synthesize findings from all 6 research subtasks
- Address each original question with evidence or 'not known'
- Connect findings to our specific PHR results (58/72 copies, C3/C11 communities)
- Create detailed research summary with citations

## Input Files
- or4f_functional_characterization.md
- subtelomeric_or_biology_literature.md
- or4f_copy_number_variation.md
- multi_copy_or_significance.md
- or4f_disease_associations.md
- phr_or_biology_connection.md

## Output
Save as deep_research_olfactory_receptors.md

## Validation
- Each of 6 original questions addressed
- Literature references cited throughout
- Connection to PHR findings (58 copies, 4 families, C3/C11) made
- All input research files integrated

Depends on

Required by

(none)

Log

2026-04-02T03:49:15.886714446+00:00 Lightweight assignment: agent=Default Creator (ead7f530), exec_mode=full, context_scope=graph, reason=Creator role fits synthesis/integration task; needs file access to read 6 research inputs and write comprehensive summary output with citations and PHR connections.
2026-04-02T03:49:25.200259168+00:00 Spawned by coordinator --executor claude --model claude-sonnet-4-20250514
2026-04-02T03:49:40.763206986+00:00 Starting integration of OR4F deep research findings - will read all 6 input files and create comprehensive summary
2026-04-02T03:50:11.656624474+00:00 Read all 6 input files, now synthesizing comprehensive integrated summary
2026-04-02T03:52:47.461901140+00:00 Created comprehensive integrated summary in deep_research_olfactory_receptors.md - synthesized all 6 research subtasks
2026-04-02T03:53:00.444461467+00:00 Validated: ✓ Each of 6 original questions addressed with evidence, ✓ Literature references cited throughout, ✓ Connection to PHR findings (58 copies, 4 families, C3/C11) made, ✓ All input research files integrated into comprehensive synthesis
2026-04-02T03:53:11.881430774+00:00 Committed: 97d4ec9 — pushed to remote
2026-04-02T03:53:17.820169582+00:00 Task marked as done