review-zoom-v9-slide06a-q-axis-kbp

Metadata

Status	done
Assigned	`agent-1251`
Agent identity	`3577bc75d6ed4f1947509aa5c086c91ce7c997c7806dab6bf6affac647452647`
Created	2026-05-08T15:00:27.686511581+00:00
Started	2026-05-08T15:04:38.930586974+00:00
Completed	2026-05-08T15:18:07.817312404+00:00
Tags	`review-zoom`, `review-zoom-v9`, `slide06`, `length-distribution`, `kbp`, `deadline`, `eval-scheduled`
Eval score	0.93
└ blocking impact	0.95
└ completeness	0.95
└ constraint fidelity	0.85
└ coordination overhead	0.92
└ correctness	0.93
└ downstream usability	0.93
└ efficiency	0.89
└ intent fidelity	0.86
└ style adherence	0.94

Description

Patch slide 06a for v9. Erik likes the v8 heatstrip, but wants q-arm orientation and wording fixed.\n\nRequired changes:\n- Flip the q-arm x-axis/orientation so the p/q panels read like a typical chromosome visualization from p to q. The q-side should visually run toward the q telomere in a way that pairs naturally with p-to-q chromosome convention.\n- Replace 'ceiling' language with '>500 kbp' / '>500 kbp not measured' wording. Do not say 'ceiling' on the slide.\n- Standardize length units to kbp for kilobase pairs throughout this asset and recommended caption/source text. Avoid 'kb' on this slide.\n- Preserve the 10 kbp per-arm/end heatstrip concept from v8 unless a small orientation tweak requires rerendering.\n\nDeliverables: updated slide-ready PNG/PDF, source TSVs if rerendered, README, and SLIDE_PATCH.md under slides/v2-review-zoom/_revision_assets/v9/06a_q_axis_kbp/.\n\nDo not edit final Typst deck directly; leave integration to review-zoom-v9-fanin-render.

Patch slide 06a for v9. Erik likes the v8 heatstrip, but wants q-arm orientation and wording fixed.\n\nRequired changes:\n- Flip the q-arm x-axis/orientation so the p/q panels read like a typical chromosome visualization from p to q. The q-side should visually run toward the q telomere in a way that pairs naturally with p-to-q chromosome convention.\n- Replace 'ceiling' language with '>500 kbp' / '>500 kbp not measured' wording. Do not say 'ceiling' on the slide.\n- Standardize length units to kbp for kilobase pairs throughout this asset and recommended caption/source text. Avoid 'kb' on this slide.\n- Preserve the 10 kbp per-arm/end heatstrip concept from v8 unless a small orientation tweak requires rerendering.\n\nDeliverables: updated slide-ready PNG/PDF, source TSVs if rerendered, README, and SLIDE_PATCH.md under slides/v2-review-zoom/_revision_assets/v9/06a_q_axis_kbp/.\n\nDo not edit final Typst deck directly; leave integration to review-zoom-v9-fanin-render.

Depends on

done .assign-review-zoom-v9-slide06a-q-axis-kbp

Required by

Log

2026-05-08T15:00:27.659140624+00:00 Task paused
2026-05-08T15:01:48.344539082+00:00 Task published
2026-05-08T15:04:38.930591352+00:00 Spawned by coordinator --executor codex --model gpt-5.5
2026-05-08T15:04:58.277435424+00:00 Starting slide 06a patch: checking existing assets, prior WIP, and render scripts before editing.
2026-05-08T15:07:20.313810913+00:00 FANOUT_DECISION: stay inline — one asset generator and docs bundle can be patched sequentially without parallel file ownership issues.
2026-05-08T15:16:09.648593744+00:00 Validated: regenerated v9 heatstrip with Rscript; PNG is 3072x1728, PDF generated; grep found no 'ceiling' or standalone 'kb' in the v9 asset bundle; git diff --check passed.
2026-05-08T15:16:29.356095178+00:00 Validated: task is an R-rendered slide asset/docs patch; no Rust code or final Typst deck files were edited, so cargo build/test were not applicable.
2026-05-08T15:17:20.032652647+00:00 Committed and pushed: 10443cd — slide 06a q-axis/kbp asset bundle.
2026-05-08T15:18:07.817320940+00:00 Task pending eval (agent reported done; awaiting `.evaluate-*` to score)
2026-05-08T15:22:14.480883861+00:00 PendingEval → Done (evaluator passed; downstream unblocks)