review-zoom-04-hprcv2-karyogram

Metadata

Status	done
Assigned	`agent-973`
Agent identity	`3577bc75d6ed4f1947509aa5c086c91ce7c997c7806dab6bf6affac647452647`
Created	2026-05-06T20:26:21.552272280+00:00
Started	2026-05-06T20:44:24.224088865+00:00
Completed	2026-05-06T20:56:43.370240808+00:00
Tags	`bog-this-week`, `bog-deck`, `review-zoom`, `revision-fanout`, `eval-scheduled`, `git-provenance`
Eval score	0.94
└ blocking impact	0.97
└ completeness	0.92
└ constraint fidelity	0.85
└ coordination overhead	0.95
└ correctness	0.93
└ downstream usability	0.95
└ efficiency	0.95
└ intent fidelity	0.89
└ style adherence	0.96

Description

User review point 2.

Goal: evaluate replacing slide 04 Fig 1 panel A and any subsequent repeated/related genome-wide interchrom panels with the HPRCv2 karyogram image requested by Erik.

Requested asset:

https://github.com/pangenome/HPRCv2/blob/main/p_interchrom_karyogram_count_rainbow_inset.100kb.png

Requirements:

Fetch/inspect the requested image from the HPRCv2 repo.
Compare it against the current slide 04 Fig 1 panel A in the zoom deck and note which later slides/panels should also use it or reference it.
Produce a slide-ready asset copy under the zoom review set with provenance noted.
Recommend exact slide placement(s): replace 04a only, also replace related panels, or add as an additional zoom slide.
Do not edit the Typst deck; final integration owns deck edits.

Deliverables:

Candidate PNG under a task-specific revision asset directory.
Markdown note with provenance, placement recommendation, and any cropping/scaling guidance.

User review point 2.

Goal: evaluate replacing slide 04 Fig 1 panel A and any subsequent repeated/related genome-wide interchrom panels with the HPRCv2 karyogram image requested by Erik.

Requested asset:
- https://github.com/pangenome/HPRCv2/blob/main/p_interchrom_karyogram_count_rainbow_inset.100kb.png

Requirements:
- Fetch/inspect the requested image from the HPRCv2 repo.
- Compare it against the current slide 04 Fig 1 panel A in the zoom deck and note which later slides/panels should also use it or reference it.
- Produce a slide-ready asset copy under the zoom review set with provenance noted.
- Recommend exact slide placement(s): replace 04a only, also replace related panels, or add as an additional zoom slide.
- Do not edit the Typst deck; final integration owns deck edits.

Deliverables:
- Candidate PNG under a task-specific revision asset directory.
- Markdown note with provenance, placement recommendation, and any cropping/scaling guidance.

Depends on

Required by

Log

2026-05-06T20:26:21.530907533+00:00 Task paused
2026-05-06T20:28:35.239681740+00:00 Task published
2026-05-06T20:44:24.224093023+00:00 Spawned by coordinator --executor codex --model gpt-5.5
2026-05-06T20:44:42.239637480+00:00 Starting HPRCv2 karyogram review: inspecting current zoom assets, requested source image, and related interchrom panels.
2026-05-06T20:55:35.860816247+00:00 Created HPRCv2 candidate PNG copy and README note with provenance, comparison, placement recommendation, and cropping/scaling guidance.
2026-05-06T20:56:01.588338645+00:00 Validated: requested PNG fetched from HPRCv2 at main d14883c; README addresses provenance, slide 04/05/07 comparison, placement recommendation, and scaling guidance; Typst deck unchanged; git diff --cached --check passes.
2026-05-06T20:56:27.173916244+00:00 Committed: f99cf6b — pushed to origin/wg/agent-973/review-zoom-04-hprcv2-karyogram
2026-05-06T20:56:36.281177159+00:00 Validated: documentation-only task; no code/build/test changes, so cargo build/test not applicable.
2026-05-06T20:56:43.370248453+00:00 Task pending eval (agent reported done; awaiting `.evaluate-*` to score)
2026-05-06T21:12:39.688907009+00:00 PendingEval → Done (evaluator passed; downstream unblocks)