survey-heterogeneity-section

Metadata

Status	done
Assigned	`agent-634`
Agent identity	`3577bc75d6ed4f1947509aa5c086c91ce7c997c7806dab6bf6affac647452647`
Created	2026-05-04T22:32:57.287161095+00:00
Started	2026-05-04T22:44:28.960681441+00:00
Completed	2026-05-04T23:10:41.779751361+00:00
Tags	`paper-prep,survey`, `eval-scheduled`
Tokens	112433 in / 26 out
Eval score	0.90
└ blocking impact	0.80
└ completeness	0.90
└ coordination overhead	0.85
└ correctness	0.95
└ downstream usability	0.90
└ efficiency	0.85
└ intent fidelity	0.81
└ style adherence	0.92

Description

INPUT: end-to-end-report/report/04_heterogeneity.md (read fully). CONTEXT: Nature manuscript + 15-min talk; this task surveys ONE section. TASK: Extract: (1) Key findings on within-arm allele-vs-paralog distance, silhouette analysis, two-domain model — with metrics; (2) Existing figures referenced (paths); (3) Existing CSVs (paths); (4) Methods; (5) Gaps; (6) Suggested figures with captions (produced-vs-todo); (7) Talk slide takeaways. OUTPUT: paper_prep/surveys/SURVEY_04_heterogeneity.md (7 numbered sections). ACCEPTANCE: File exists, all 7 sections present, concrete paths cited.

INPUT: end-to-end-report/report/04_heterogeneity.md (read fully).
CONTEXT: Nature manuscript + 15-min talk; this task surveys ONE section.
TASK: Extract: (1) Key findings on within-arm allele-vs-paralog distance, silhouette analysis, two-domain model — with metrics; (2) Existing figures referenced (paths); (3) Existing CSVs (paths); (4) Methods; (5) Gaps; (6) Suggested figures with captions (produced-vs-todo); (7) Talk slide takeaways.
OUTPUT: paper_prep/surveys/SURVEY_04_heterogeneity.md (7 numbered sections).
ACCEPTANCE: File exists, all 7 sections present, concrete paths cited.

Depends on

done .assign-survey-heterogeneity-section

Required by

Log

2026-05-04T22:32:57.273590641+00:00 Task paused
2026-05-04T22:42:34.206558710+00:00 Task published
2026-05-04T22:43:40.524712741+00:00 Lightweight assignment: agent=random-agent-3577bc75 (3577bc75), exec_mode=full, context_scope=task, reason=Documenter role aligns exactly with survey documentation task; tradeoff (verify-against-code) matches requirement to extract and cite concrete paths from source material.
2026-05-04T22:44:28.960684968+00:00 Spawned by coordinator --executor claude --model opus
2026-05-04T22:44:36.797419972+00:00 Starting: reading source heterogeneity report
2026-05-04T22:48:47.254959319+00:00 Wrote SURVEY_04_heterogeneity.md with 7 numbered sections
2026-05-04T22:50:51.024305687+00:00 Committed: 6b87aec — pushed to remote
2026-05-04T22:51:19.614992370+00:00 Validated: 7 numbered sections present; 9 sample paths verified to exist on disk
2026-05-04T23:10:41.779752924+00:00 Task pending eval (agent reported done; awaiting `.evaluate-*` to score)
2026-05-04T23:15:56.685401590+00:00 PendingEval → Done (evaluator passed; downstream unblocks)