Metadata
| Status | done |
|---|---|
| Assigned | agent-1172 |
| Agent identity | 3577bc75d6ed4f1947509aa5c086c91ce7c997c7806dab6bf6affac647452647 |
| Created | 2026-05-08T01:37:17.454247930+00:00 |
| Started | 2026-05-08T01:40:40.205568366+00:00 |
| Completed | 2026-05-08T01:55:17.988562870+00:00 |
| Tags | review-zoom, review-zoom-v8, slide06, length-distribution, deadline, eval-scheduled |
| Eval score | 0.95 |
| └ blocking impact | 0.95 |
| └ completeness | 0.96 |
| └ coordination overhead | 0.97 |
| └ correctness | 0.95 |
| └ downstream usability | 0.96 |
| └ efficiency | 0.93 |
| └ intent fidelity | 0.90 |
| └ style adherence | 0.95 |
Description
Make slide 06a talk-ready. Erik likes the v7 idea but hates the mega/wide bins. Current v7 uses 25 kb bins, not 10 kb. Build alternatives that preserve information from the older all-chromosome/end distribution plot while remaining readable.\n\nRequired outputs:\n- Confirm the exact current bin size in README: v7 is 25 kb.\n- Render a 10 kb-bin histogram version.\n- Render a 5 kb or otherwise finer-bin sensitivity version if readable.\n- Recover/recreate an old-style all-chromosome/end representation where each chromosome end is represented, but make it legible. Candidate designs: compact dot/rug + small multiples by p/q or chromosome; beeswarm/ridgeline by chromosome arm; heatstrip/tile by chromosome end; or histogram with chromosome-end colored marginal ticks.\n- Avoid coloring 41 chromosome ends with an impossible legend unless the labels remain readable. Prefer p/q grouping, chromosome-number labels, or direct end labels where useful.\n- Keep the 500 kb analysis ceiling visually explicit: this analysis searched/measured terminal 500 kb windows; values at/near 500 kb are right-censored, not evidence that longer sequence is absent.\n\nAcceptance criteria:\n- At least 2 candidate PNG/PDF assets plus a recommendation in SLIDE_PATCH.md.\n- Current v7 25 kb bin size and new proposed bin size are documented.\n- Main recommended slide is quickly legible and not dominated by huge blocky bins.\n- Axis labels and 500 kb ceiling text are readable in a 16:9 slide.\n\nDo not edit final Typst deck directly; leave integration to review-zoom-v8-fanin-render.
Depends on
Required by
Log
- 2026-05-08T01:37:17.427574093+00:00 Task paused
- 2026-05-08T01:39:02.384680904+00:00 Task published
- 2026-05-08T01:40:40.205573086+00:00 Spawned by coordinator --executor codex --model gpt-5.5
- 2026-05-08T01:41:00.312684848+00:00 Starting slide 06a length-distribution asset/documentation work; checking branch state and existing deck/data sources.
- 2026-05-08T01:42:48.945908044+00:00 FANOUT_DECISION: stay inline — one canonical TSV and one revision-asset directory; alternatives share the same generator and docs so parallel subtasks would contend on the same files.
- 2026-05-08T01:50:50.949929948+00:00 Rendered v8 slide 06a candidates: 10 kb histogram, 5 kb sensitivity histogram, and 10 kb p/q chromosome-end heatstrip; added README, SLIDE_PATCH, and VALIDATION docs.
- 2026-05-08T01:52:13.435654776+00:00 Validated: R generator reruns successfully; PNGs are 3072x1728 16:9; README/SLIDE_PATCH document v7 25 kb bins, proposed 10 kb bins, 5 kb sensitivity, per-end heatstrip, and 500 kb right-censoring.
- 2026-05-08T01:52:29.711563077+00:00 Validated: no Cargo.toml found at repo depth 3; cargo build/test are not applicable for this slide documentation/render artifact task; git diff --check passed.
- 2026-05-08T01:54:26.371099128+00:00 Committed: 8c621e0 — pushed to remote branch wg/agent-1172/review-zoom-v8-slide06a-length-alternatives.
- 2026-05-08T01:55:17.988571487+00:00 Task pending eval (agent reported done; awaiting `.evaluate-*` to score)
- 2026-05-08T02:00:46.275285180+00:00 PendingEval → Done (evaluator passed; downstream unblocks)